Basic Statistics
Measure | Value |
---|---|
Filename | SRR1976948_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 1000000 |
Filtered Sequences | 0 |
Sequence length | 251 |
%GC | 45 |
Per base sequence quality
Per sequence quality scores
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GGGGG | 1100375 | 6.571517 | 23.379585 | 240-247 |
CCCCC | 661030 | 4.7139206 | 11.045358 | 240-247 |
AAAAA | 1622005 | 4.304051 | 7.25235 | 240-247 |
TTTTT | 1340165 | 3.8110087 | 4.51884 | 8 |
CGGGG | 505080 | 3.1253042 | 8.077499 | 240-247 |
CCGGG | 462745 | 2.9667506 | 5.8500285 | 240-247 |
CCCGG | 439495 | 2.9194467 | 5.1772265 | 240-247 |
GGCGG | 438430 | 2.712891 | 5.5525045 | 240-247 |
CCCCG | 384040 | 2.6432018 | 5.0517774 | 240-247 |
GGGGC | 419900 | 2.5982323 | 6.298634 | 240-247 |
GGGCG | 357040 | 2.209271 | 5.268765 | 240-247 |
GCGGG | 347730 | 2.151663 | 5.131194 | 240-247 |